Haipeng Wang

Postdoctoral Researcher
Royal Institute of Technology (KTH)

Science for Life Laboratory
Karolinska Institutet Science Park,
Tomtebodavägen 23A
17165 Solna
haipeng dot wangat scilifelabdotse
Selected Publications

  • Morten Källberg*, Haipeng Wang*, Sheng Wang, et al. (*equal contribution) Template-based protein structure modeling using the RaptorX web server. Nature Protocols (accepted). 2012.
  • Zuo-Fei Yuan, Chao Liu, Hai-Peng Wang, et al. pParse: A method for accurate determination of monoisotopic peaks in high-resolution mass spectra. Proteomics, 12(2): 226-35, 2012.
  • Ding Ye, Yan Fu, Rui-Xiang Sun, Hai-Peng Wang, et al. Open MS/MS Spectral Library Search to Identify Unanticipated Post-Translational Modifications and Increase Spectral Identification Rate. Bioinformatics, 26(12): i399-i406. 2010.
  • Chao Liu, Hai-Peng Wang, Yan Fu, et al. Review: Prediction of Peptide Retention Time in Reversed-phase Liquid Chromatography and Its Application in Protein Identification. Chinese Journal of Chromatography, 28(6): 529-534. 2010. [In Chinese]
  • You Li, Hao Chi, Le-Heng Wang, Hai-Peng Wang, et al. Speeding up Mass Spectrometry Based Protein Identification by Peptide and Spectrum Indexing. Rapid Communications in Mass Spectrometry, 24(6): 807–814, 2010.
  • Wei Jia, Zhuang Lu, Yan Fu, Hai-Peng Wang, et al. A Strategy for Precise and Large-Scale Identification of Core Fucosylated Glycoproteins. Molecular & Cellular Proteomics, 8: 913–923, 2009.
  • Yan Fu, Wei Jia, Zhuang Lu, Haipeng Wang, et al. Efficient Discovery of Abundant Post-Translational Modifications and Spectral Pairs Using Peptide Mass and Retention Time Differences. BMC Bioinformatics, 10(Suppl 1): S50, 2009.
  • Haipeng Wang. Data Mining in Protein Identification by Tandem Mass Spectrometry. In: John Wang (ed.) Encyclopedia of Data Warehousing and Mining (2nd edition), Idea Group Publishing, 2008. [Invited Book Chapter]
  • Leheng Wang, Dequan Li, Yan Fu, Haipeng Wang, et al. pFind 2.0: A Software Package for Peptide and Protein Identification via Tandem Mass Spectrometry. Rapid Communications in Mass Spectrometry, 21(18): 2985–2991, 2007.
  • Haipeng Wang, Yan Fu, Ruixiang Sun, et al. An SVM Scorer for More Sensitive and Reliable Peptide Identification via Tandem Mass Spectrometry. In: Proceedings of the Pacific Symposium on Biocomputing (PSB), Hawaii, USA, Jan. 3–7, 2006.
  • Haipeng Wang, Yan Fu, Ruixiang Sun, et al. pepReap: A Peptide Identification Algorithm Using Support Vector Machines. Journal of Computer Research and Development, 42(9): 1511–18, 2005. [In Chinese]
  • Yan Fu, Qiang Yang, Charles X. Ling, Haipeng Wang, et al. A Kernel-Based Case Retrieval Algorithm with Application to Bioinformatics. In: LNAI 3157: 544–553, Proceedings of the PRICAI, Auckland, New Zealand, Aug. 9–13, 2004.

Last update: May 4th, 2012.